Basic Information
Locus ID:
gene.Posoc02g10760
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 168631041 | 168635102 | - | gene.Posoc02g10760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.18 | 25,111.83 Da | 26.25 | 86.83 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00043 | CYCLIN | 2 | 69 | 1.3905E-15 | IPR013763 |
| Pfam | PF00134 | Cyclin, N-terminal domain | 3 | 74 | 2.5E-22 | IPR006671 |
| Pfam | PF02309 | AUX/IAA family | 90 | 221 | 2.0E-64 | IPR033389 |
| SUPERFAMILY | SSF47954 | Cyclin-like | 3 | 69 | 1.79E-22 | IPR036915 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 128 | 221 | 9.32E-16 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 127 | 221 | 6.6E-33 | - |
| Gene3D | G3DSA:1.10.472.10 | - | 2 | 75 | 1.4E-26 | - |
| SMART | SM00385 | cyclin_7 | 1 | 75 | 2.7E-11 | IPR013763 |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 133 | 221 | 21.262751 | IPR000270 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G22670.2 | indoleacetic acid-induced protein 8. IAA8 (IAA8) gene is auxin inducible. | 0 |
| RefSeq | XP_039124818.1 | auxin-responsive protein IAA21-like [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q38826 | Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1YVV6 | Auxin-responsive protein OS=Anthurium amnicola OX=1678845 GN=IAA27_2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology