Basic Information
Locus ID:
gene.Posoc02g07880
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 60305078 | 60305863 | + | gene.Posoc02g07880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 28,799.06 Da | 78.31 | 64.52 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 102 | 145 | 8.41686E-16 | - |
| Pfam | PF13639 | Ring finger domain | 102 | 145 | 1.7E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 83 | 150 | 3.53E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 78 | 155 | 2.3E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 103 | 144 | 5.4E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 103 | 145 | 12.061441 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 197 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16720.1 | TOXICOS EN LEVADURA 2. RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. | 0 |
| RefSeq | XP_039037700.1 | RING-H2 finger protein ATL2-like [Hibiscus syriacus] | 0 |
| Q8L9T5 | RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6A2YC14 | Putative Subunit H2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112159pilonHSYRG00351 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology