Basic Information
Locus ID:
gene.Posoc02g07800
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
MAC/Perforin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 60096127 | 60099694 | + | gene.Posoc02g07800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 27,857.75 Da | 37.86 | 97.04 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53474 | alpha/beta-Hydrolases | 179 | 247 | 3.21E-10 | IPR029058 |
| Gene3D | G3DSA:3.40.50.1820 | alpha/beta hydrolase | 158 | 248 | 2.2E-10 | IPR029058 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24290.2 | MAC/Perforin domain-containing protein. | 0 |
| RefSeq | XP_020107369.1 | MACPF domain-containing protein At4g24290-like [Ananas comosus] | 0 |
| Q9STW5 | MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana OX=3702 GN=At4g24290 PE=2 SV=1 | 0 | |
| TrEMBL | R7W547 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000041905 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno09g09490 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00000426 |
| Posidoniaceae | Posidonia oceanica | 15 | gene.Posoc01g27490, gene.Posoc02g07800, gene.Posoc03g08260 ... |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G3783 |