Basic Information
Locus ID:
gene.Posoc02g05730
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 29544549 | 29549216 | - | gene.Posoc02g05730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.24 | 45,551.73 Da | 48.36 | 94.71 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 307 | 410 | 8.5E-24 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 224 | 7.99E-23 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 295 | 411 | 6.07E-40 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 12 | 241 | 1.6E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 279 | 415 | 7.8E-44 | - |
| SMART | SM00220 | serkin_6 | 178 | 415 | 0.0024 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 81 | 416 | 23.4674 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 327 | 339 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_018674031.1 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X2 [Musa acuminata subsp. malaccensis] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A804KKG8 | Protein kinase domain-containing protein OS=Musa acuminata subsp. malaccensis OX=214687 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Oryza coarctata | 2 | Oco02G023950, Oco02G023970 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-11608, nbis-gene-12261, nbis-gene-3395 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc02g05690, gene.Posoc02g05730 |