Basic Information
Locus ID:
gene.Posoc01g31580
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 414305606 | 414306421 | + | gene.Posoc01g31580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.56 | 29,639.19 Da | 58.52 | 71.29 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 122 | 165 | 1.20709E-16 | - |
| Pfam | PF13639 | Ring finger domain | 122 | 165 | 1.9E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 96 | 171 | 1.03E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 78 | 170 | 7.2E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 123 | 164 | 1.9E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 123 | 165 | 12.149959 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 271 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16720.1 | TOXICOS EN LEVADURA 2. RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. | 0 |
| RefSeq | XP_006419513.1 | RING-H2 finger protein ATL2 [Citrus clementina] | 0 |
| Q8L9T5 | RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1D1Z1N2 | RING-H2 finger protein ATL2 OS=Anthurium amnicola OX=1678845 GN=ATL2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology