Basic Information
Locus ID:
gene.Posoc01g31350
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
PAPA-1-like family protein zinc finger (HIT type) family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 412370988 | 412374802 | - | gene.Posoc01g31350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.86 | 82,509.53 Da | 66.09 | 52.08 | -1.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 708 | 739 | 9.5E-7 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 607 | 690 | 1.8E-19 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 607 | 692 | 4.4E-30 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 564 | 582 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 528 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 537 | 563 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 621 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 621 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 389 | - | - |
| Coils | Coil | Coil | 599 | 633 | - | - |
| Coils | Coil | Coil | 645 | 665 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.2 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_043725242.1 | nucleolin 1-like isoform X1 [Telopea speciosissima] | 0 |
| TrEMBL | A0A8B7BLR5 | protein starmaker-like OS=Phoenix dactylifera OX=42345 GN=LOC103700982 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology