Basic Information
Locus ID:
gene.Posoc01g28890
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 385183404 | 385187360 | + | gene.Posoc01g28890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 59,271.10 Da | 38.11 | 92.52 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 404 | 463 | 3.11601E-8 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 13 | 302 | 3.08637E-112 | - |
| CDD | cd00051 | EFh | 438 | 505 | 1.02464E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 14 | 303 | 2.6E-59 | IPR000719 |
| Pfam | PF13202 | EF hand | 405 | 422 | 0.0046 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 436 | 505 | 3.2E-15 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 324 | 2.29E-78 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 349 | 507 | 4.16E-32 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 71 | 130 | 1.0E-11 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 347 | 513 | 4.7E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 9 | 61 | 8.1E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 131 | 346 | 3.8E-60 | - |
| SMART | SM00054 | efh_1 | 401 | 429 | 1.1 | IPR002048 |
| SMART | SM00220 | serkin_6 | 14 | 303 | 1.9E-90 | IPR000719 |
| SMART | SM00054 | efh_1 | 479 | 507 | 1.1E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 437 | 465 | 0.0075 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 433 | 468 | 12.588623 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 14 | 303 | 47.452797 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 404 | 432 | 9.157488 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 475 | 510 | 14.039183 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 410 | 422 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 488 | 500 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 20 | 45 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 164 | 176 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 446 | 458 | - | IPR018247 |
| PRINTS | PR00450 | Recoverin family signature | 451 | 469 | 3.9E-9 | - |
| PRINTS | PR00450 | Recoverin family signature | 405 | 426 | 3.9E-9 | - |
| PRINTS | PR00450 | Recoverin family signature | 429 | 448 | 3.9E-9 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38910.1 | calcium-dependent protein kinase 20. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_008792453.1 | calcium and calcium/calmodulin-dependent serine/threonine-protein kinase-like [Phoenix dactylifera] | 0 |
| Q43531 | Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase OS=Lilium longiflorum OX=4690 GN=CCAMK PE=1 SV=1 | 0 | |
| TrEMBL | A0A200Q079 | Protein kinase domain OS=Macleaya cordata OX=56857 GN=BVC80_1321g17 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30168840 |
| Apiaceae | Apium graveolens | 1 | Ag3G02085 |
| Arecaceae | Cocos nucifera | 2 | COCNU_04G005670, COCNU_04G005700 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103709055 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_02.1301.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G25598 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G1578 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G1608 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.1013 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00006959, Pov_00014745 |
| Poaceae | Echinochloa crus-galli | 3 | AH05.1968, BH05.2092, CH05.2164 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0368830, gene-QOZ80_5BG0416380 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0069960.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_013966 |
| Poaceae | Oryza coarctata | 2 | Oco09G012740, Oco10G012820 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g41090.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G240800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0504440, Pt_Chr0504501 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr18G012590, Chr22G005170 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G495900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG045650, gene_TRIDC1BG051680 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G307200.1, TraesCS1B02G318000.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb200350_P004, Zm00001eb306730_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-25330 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g28476 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g28890 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1112 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-6503 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-20877 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-21100 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000016l.840 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017089 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-11027, nbisL1-mrna-21129, nbisL1-mrna-21130 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13317 |
| Salicaceae | Populus euphratica | 2 | populus_peu06012, populus_peu19879 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132645338 |
| Solanaceae | Solanum chilense | 1 | SOLCI001256100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107028598 |