Basic Information
Locus ID:
gene.Posoc01g28510
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 381849750 | 381854959 | - | gene.Posoc01g28510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 42,268.88 Da | 59.28 | 89.97 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16474 | RING-H2_RNF111_like | 324 | 368 | 8.76006E-19 | - |
| Pfam | PF13639 | Ring finger domain | 324 | 366 | 1.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 319 | 371 | 3.53E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 302 | 374 | 5.0E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 325 | 365 | 1.8E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 325 | 366 | 12.533537 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 178 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G68070.1 | Zinc finger, C3HC4 type (RING finger) family protein. | 0 |
| RefSeq | XP_008778191.1 | E3 ubiquitin-protein ligase At1g12760-like [Phoenix dactylifera] | 0 |
| Q8GUU2 | E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0HWC4 | E3 ubiquitin protein ligase RIE1 OS=Cocos nucifera OX=13894 GN=COCNU_01G016400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology