Basic Information
Locus ID:
gene.Posoc01g27630
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Ring finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 376308565 | 376316583 | + | gene.Posoc01g27630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.30 | 53,233.18 Da | 39.69 | 83.66 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 114 | 360 | 3.5E-29 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 64 | 388 | 8.8E-16 | IPR015943 |
| SMART | SM00320 | WD40_4 | 275 | 315 | 0.11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 193 | 228 | 320.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 98 | 141 | 240.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 318 | 359 | 0.73 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40810.1 | homolog of yeast autophagy 18C. | 0 |
| RefSeq | XP_043697997.1 | autophagy-related protein 18c-like [Telopea speciosissima] | 0 |
| Q8GYD7 | Autophagy-related protein 18c OS=Arabidopsis thaliana OX=3702 GN=ATG18C PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0I5Q4 | Autophagy-related protein 18c OS=Cocos nucifera OX=13894 GN=COCNU_04G004930 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology