Basic Information
Locus ID:
gene.Posoc01g26440
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Tim10/DDP family zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 366525310 | 366534007 | + | gene.Posoc01g26440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 24,165.83 Da | 39.64 | 67.99 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02953 | Tim10/DDP family zinc finger | 76 | 113 | 1.9E-11 | IPR004217 |
| SUPERFAMILY | SSF144122 | Tim10-like | 75 | 114 | 8.5E-13 | IPR035427 |
| Gene3D | G3DSA:1.10.287.810 | Mitochondrial import inner membrane translocase subunit tim13 like domains | 60 | 119 | 1.1E-13 | IPR035427 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29530.1 | Tim10/DDP family zinc finger protein. Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus. | 0 |
| RefSeq | XP_008643664.1 | uncharacterized protein LOC100282321 isoform X1 [Zea mays] | 0 |
| Q9ZW33 | Mitochondrial import inner membrane translocase subunit TIM10 OS=Arabidopsis thaliana OX=3702 GN=TIM10 PE=1 SV=1 | 0 | |
| TrEMBL | B6T665 | Mitochondrial import inner membrane translocase subunit Tim10 OS=Zea mays OX=4577 GN=100282321 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Posidoniaceae | Posidonia oceanica | 37 | gene.Posoc01g06680, gene.Posoc01g06880, gene.Posoc01g26440 ... |