Basic Information
Locus ID:
gene.Posoc01g26160
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 365647774 | 365664818 | + | gene.Posoc01g26160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 76,359.34 Da | 42.60 | 85.78 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 138 | 197 | 1.8E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 399 | 670 | 8.7E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 1.2E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 232 | 3.11E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 378 | 670 | 6.79E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 360 | 474 | 1.8E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 476 | 693 | 7.4E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 253 | 4.7E-48 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 160 | 183 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 114 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 184 | 206 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 136 | 159 | 35.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 397 | 673 | 33.262264 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 682 | 701 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 687 | 701 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 345 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_010273793.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 6 [Nelumbo nucifera] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8BBA4 | protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Nelumbo nucifera OX=4432 GN=LOC104609239 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology