Basic Information
Locus ID:
gene.Posoc01g26150
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 365583955 | 365584932 | - | gene.Posoc01g26150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.81 | 34,394.95 Da | 42.53 | 74.37 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 103 | 146 | 1.5181E-21 | - |
| Pfam | PF13639 | Ring finger domain | 103 | 146 | 1.6E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 84 | 153 | 1.09E-23 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 81 | 153 | 4.0E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 104 | 145 | 1.9E-7 | IPR001841 |
| SMART | SM01197 | FANCL_C_2 | 100 | 154 | 0.004 | - |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 104 | 146 | 12.223724 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 246 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53820.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_010917352.1 | RING-H2 finger protein ATL3 [Elaeis guineensis] | 0 |
| P0C035 | RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9QYC6 | RING-H2 finger protein ATL3 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105041968 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology