Basic Information
Locus ID:
gene.Posoc01g25950
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 362722295 | 362724430 | - | gene.Posoc01g25950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 50,046.74 Da | 49.96 | 67.58 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 220 | 352 | 1.3E-18 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 420 | 443 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 99 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042455041.1 | uncharacterized protein LOC122039225 [Zingiber officinale] | 0 |
| TrEMBL | A0A843TWE0 | Serine/threonine protein kinase OS=Colocasia esculenta OX=4460 GN=Taro_007768 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag8G00744 |
| Posidoniaceae | Posidonia oceanica | 12 | gene.Posoc01g25390, gene.Posoc01g25950, gene.Posoc01g29540 ... |
| Zosteraceae | Zostera marina | 6 | Zosma02g07610.v3.1, Zosma02g07810.v3.1, Zosma04g11340.v3.1 ... |