Basic Information
Locus ID:
gene.Posoc01g23760
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Short Name:
SERK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 341144010 | 341167735 | - | gene.Posoc01g23760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 70,530.68 Da | 40.89 | 95.00 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 41 | 80 | 5.4E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 314 | 583 | 2.9E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 132 | 191 | 5.4E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 292 | 586 | 4.79E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 212 | 3.74E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 282 | 387 | 8.9E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 388 | 605 | 1.5E-67 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 226 | 1.7E-58 | IPR032675 |
| SMART | SM00220 | serkin_6 | 313 | 585 | 9.4E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 313 | 590 | 35.961857 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 434 | 446 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 319 | 341 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 238 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71830.1 | somatic embryogenesis receptor-like kinase 1. Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. later | 0 |
| RefSeq | XP_008809508.2 | LRR receptor kinase BAK1-like [Phoenix dactylifera] | 0 |
| B8BB68 | LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CZ25 | LRR receptor kinase BAK1-like OS=Phoenix dactylifera OX=42345 GN=LOC103721192 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology