Basic Information
Locus ID:
gene.Posoc01g19440
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 296225062 | 296225595 | + | gene.Posoc01g19440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.69 | 19,661.91 Da | 63.15 | 87.63 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 127 | 170 | 2.53787E-16 | - |
| Pfam | PF13639 | Ring finger domain | 127 | 170 | 2.7E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 127 | 173 | 2.12E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 100 | 174 | 1.2E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 128 | 169 | 2.2E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 128 | 170 | 12.946621 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30370.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_008782069.1 | RING-H2 finger protein ATL56-like isoform X6 [Phoenix dactylifera] | 0 |
| Q9M0C3 | RING-H2 finger protein ATL14 OS=Arabidopsis thaliana OX=3702 GN=ATL14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NZG1 | RING/U-box superfamily protein OS=Zostera marina OX=29655 GN=ZOSMA_52G00050 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology