Basic Information
Locus ID:
gene.Posoc01g18890
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Plant mobile domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 290576193 | 290578381 | - | gene.Posoc01g18890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 62,118.37 Da | 57.96 | 85.21 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10536 | Plant mobile domain | 3 | 144 | 3.3E-19 | IPR019557 |
| Gene3D | G3DSA:1.10.287.1490 | - | 342 | 488 | 3.6E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 534 | 552 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 559 | - | - |
| Coils | Coil | Coil | 440 | 474 | - | - |
| Coils | Coil | Coil | 348 | 368 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17930.1 | Aminotransferase-like, plant mobile domain family protein. | 0 |
| RefSeq | XP_015575439.1 | protein MAIN-LIKE 2 [Ricinus communis] | 0 |
| Q9LMT7 | Protein MAINTENANCE OF MERISTEMS OS=Arabidopsis thaliana OX=3702 GN=MAIN PE=1 SV=1 | 0 | |
| TrEMBL | A0A843X1B4 | PMD domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_047683 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Posidoniaceae | Posidonia oceanica | 11 | gene.Posoc01g11930, gene.Posoc01g18890, gene.Posoc01g26630 ... |