Basic Information
Locus ID:
gene.Posoc01g17140
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 271400510 | 271449880 | + | gene.Posoc01g17140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 82,768.70 Da | 40.29 | 94.55 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 44 | 341 | 4.637E-170 | - |
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 358 | 659 | 3.36215E-160 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 79 | 335 | 5.2E-6 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 363 | 655 | 1.5E-35 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 357 | 659 | 7.06E-45 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 44 | 341 | 5.76E-40 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 356 | 659 | 1.2E-48 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 42 | 342 | 4.6E-33 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 44 | 342 | 34.954659 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 358 | 660 | 33.52552 | IPR030395 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 715 | 735 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 712 | 735 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55480.1 | SHV3-like 1. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_010928867.1 | glycerophosphodiester phosphodiesterase GDPDL3 [Elaeis guineensis] | 0 |
| Q9FJ62 | Glycerophosphodiester phosphodiesterase GDPDL4 OS=Arabidopsis thaliana OX=3702 GN=GDPDL4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PJI7 | glycerophosphodiester phosphodiesterase OS=Zostera marina OX=29655 GN=ZOSMA_221G00170 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology