Basic Information
Locus ID:
gene.Posoc01g10240
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
RING finger and CHY zinc finger domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 74791528 | 74840867 | - | gene.Posoc01g10240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 31,780.73 Da | 49.18 | 57.73 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05495 | CHY zinc finger | 39 | 113 | 1.0E-20 | IPR008913 |
| Pfam | PF14599 | Zinc-ribbon | 215 | 273 | 9.0E-27 | IPR039512 |
| Pfam | PF13639 | Ring finger domain | 167 | 210 | 1.0E-8 | IPR001841 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 104 | 161 | 4.45E-20 | IPR037275 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 37 | 102 | 8.89E-18 | IPR037274 |
| SUPERFAMILY | SSF57850 | RING/U-box | 167 | 217 | 8.95E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 150 | 239 | 1.6E-12 | IPR013083 |
| Gene3D | G3DSA:2.20.28.10 | - | 240 | 277 | 4.1E-17 | - |
| SMART | SM00184 | ring_2 | 168 | 210 | 1.4E-7 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 32 | 101 | 24.724062 | IPR008913 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 168 | 211 | 12.25323 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 103 | 167 | 33.776466 | IPR017921 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18650.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_020580636.1 | E3 ubiquitin-protein ligase MIEL1 isoform X1 [Phalaenopsis equestris] | 0 |
| Q8VZK0 | E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana OX=3702 GN=MIEL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1Y8T3 | RING finger and CHY zinc finger domain-containing protein 1 OS=Anthurium amnicola OX=1678845 GN=Rchy1_9 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology