Basic Information
Locus ID:
gene.Posoc01g09780
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
F-box WD-40 repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 71353001 | 71353699 | - | gene.Posoc01g09780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.70 | 21,857.38 Da | 36.28 | 103.37 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 107 | 143 | 4.9E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 87 | 148 | 6.54E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 100 | 143 | 2.9E-7 | - |
| SMART | SM00256 | fbox_2 | 104 | 144 | 3.8E-5 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 98 | 145 | 8.83511 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 92 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_050283579.1 | F-box/WD-40 repeat-containing protein At3g52030 isoform X5 [Quercus robur] | 0 |
| TrEMBL | A0A0K9NVZ0 | F-box/WD-40 repeat-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_56G00440 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Posidoniaceae | Posidonia oceanica | 11 | gene.Posoc01g09780, gene.Posoc01g18270, gene.Posoc01g19460 ... |