Basic Information
Locus ID:
gene.Posoc01g07770
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 45132031 | 45137897 | + | gene.Posoc01g07770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 45,330.53 Da | 33.88 | 92.13 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 59 | 322 | 3.9E-116 | IPR013765 |
| SUPERFAMILY | SSF54752 | RecA protein, C-terminal domain | 324 | 379 | 3.66E-7 | IPR023400 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 56 | 322 | 4.85E-57 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 87 | 382 | 1.9E-108 | IPR027417 |
| SMART | SM00382 | AAA_5 | 110 | 283 | 5.3E-9 | IPR003593 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 57 | 377 | 3.3E-133 | IPR013765 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 88 | 247 | 35.975143 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 251 | 327 | 25.472473 | IPR020587 |
| ProSitePatterns | PS00321 | recA signature. | 268 | 276 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 146 | 175 | 6.8E-74 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 218 | 247 | 6.8E-74 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 298 | 327 | 6.8E-74 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 180 | 209 | 6.8E-74 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 265 | 293 | 6.8E-74 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 351 | 368 | 6.8E-74 | IPR013765 |
| Hamap | MF_00268 | Protein RecA [recA]. | 57 | 383 | 42.383247 | IPR013765 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19490.1 | recA DNA recombination family protein. | 0 |
| RefSeq | XP_020104766.1 | DNA repair protein recA homolog 3, mitochondrial isoform X1 [Ananas comosus] | 0 |
| Q9ZUP2 | DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2 | 0 | |
| TrEMBL | A0A834YQM6 | DNA repair protein recA homolog 3, mitochondrial-like OS=Tetracentron sinense OX=13715 GN=HHK36_025301 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology