Basic Information
Locus ID:
gene.Posoc01g06880
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
DNA repair protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 35854572 | 35857553 | - | gene.Posoc01g06880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 31,679.15 Da | 50.48 | 72.31 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 105 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80420.4 | BRCT domain-containing DNA repair protein. | 0 |
| RefSeq | XP_010110299.1 | DNA-repair protein XRCC1 [Morus notabilis] | 0 |
| Q24JK4 | DNA-repair protein XRCC1 OS=Arabidopsis thaliana OX=3702 GN=XRCC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NZZ5 | DNA repair protein XRCC1-like OS=Zostera marina OX=29655 GN=ZOSMA_46G00560 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Posidoniaceae | Posidonia oceanica | 37 | gene.Posoc01g06680, gene.Posoc01g06880, gene.Posoc01g26440 ... |