Basic Information
Locus ID:
gene.Posoc01g04310
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 22454161 | 22475682 | - | gene.Posoc01g04310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 115,143.23 Da | 40.84 | 85.25 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 41 | 317 | 1.60909E-167 | - |
| Pfam | PF09261 | Alpha mannosidase middle domain | 358 | 450 | 2.1E-21 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 606 | 818 | 1.4E-41 | IPR011682 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 900 | 1005 | 5.6E-9 | IPR041147 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 42 | 353 | 9.3E-93 | IPR000602 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 29 | 354 | 2.17E-107 | IPR011330 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 464 | 1009 | 6.43E-137 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 358 | 457 | 1.77E-28 | IPR028995 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 322 | 399 | 1.4E-29 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 400 | 456 | 4.9E-23 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1180 | - | 478 | 601 | 7.7E-29 | IPR013780 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 41 | 321 | 4.5E-120 | IPR027291 |
| Gene3D | G3DSA:2.70.98.30 | - | 602 | 866 | 5.9E-92 | - |
| Gene3D | G3DSA:2.60.40.1360 | - | 886 | 1013 | 7.8E-35 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 358 | 432 | 5.7E-24 | IPR015341 |
| Coils | Coil | Coil | 947 | 967 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26720.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_008791035.2 | alpha-mannosidase At3g26720 [Phoenix dactylifera] | 0 |
| P94078 | Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9Q1F5 | Alpha-mannosidase OS=Zostera marina OX=29655 GN=ZOSMA_11G00200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology