HalophFGD

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Basic Information
Locus ID: gene.Posoc01g02020
Species & Taxonomic ID: Posidonia oceanica & 55489
Genome Assembly: GCA_037176725.1
Description: F-box domain
Maps and Mapping Data
Chromosome Start End Strand ID
Chr01 7627293 7628405 + gene.Posoc01g02020
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.53 42,541.80 Da 37.44 85.84 -0.13
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03478 Protein of unknown function (DUF295) 291 339 7.9E-6 IPR005174
SUPERFAMILY SSF81383 F-box domain 21 79 1.19E-5 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_010934497.1 uncharacterized protein LOC105054631 [Elaeis guineensis] 0
TrEMBL A0A1D1Y8V7 Putative F-box protein At4g22030 (Fragment) OS=Anthurium amnicola OX=1678845 GN=At4g22030_3 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Arecaceae Phoenix dactylifera 2 gene-LOC103720058, gene-LOC120104557
Cymodoceaceae Cymodocea nodosa 3 gene.Cymno04g18060, gene.Cymno05g00800, gene.Cymno05g00830
Hydrocharitaceae Thalassia testudinum 2 gene.Thate02g14040, gene.Thate09g04500
Posidoniaceae Posidonia oceanica 16 gene.Posoc01g02010, gene.Posoc01g02020, gene.Posoc01g02060 ...
gene.Posoc01g28460, gene.Posoc01g32550, gene.Posoc01g39780, gene.Posoc02g11520, gene.Posoc02g20470, gene.Posoc02g20480, gene.Posoc10g11770, gene.Posoc10g11780, gene.Posoc10g11800, gene.Posoc10g11820, gene.Posoc10g11830, gene.Posoc10g11850, gene.Posoc10g11870
Tamaricaceae Tamarix chinensis 1 TC12G1454
Zosteraceae Zostera marina 1 Zosma06g00150.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.