Basic Information
Locus ID:
gene.Cymno18g04860
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr18 | 10928516 | 10931091 | + | gene.Cymno18g04860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.87 | 71,193.59 Da | 43.95 | 83.15 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 92 | 434 | 2.29062E-82 | IPR034161 |
| CDD | cd05476 | pepsin_A_like_plant | 421 | 663 | 1.7111E-55 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 93 | 263 | 1.7E-50 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 284 | 430 | 2.4E-27 | IPR032799 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 514 | 659 | 1.0E-22 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 442 | 664 | 1.06E-45 | IPR021109 |
| SUPERFAMILY | SSF50630 | Acid proteases | 89 | 435 | 1.56E-87 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 266 | 439 | 4.2E-40 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 488 | 666 | 8.8E-40 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 76 | 263 | 2.4E-48 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 93 | 430 | 42.06023 | IPR033121 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 472 | 659 | 13.82934 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 312 | 323 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31450.1 | Eukaryotic aspartyl protease family protein. | 0 |
| RefSeq | XP_009398880.1 | PREDICTED: aspartic proteinase CDR1-like [Musa acuminata subsp. malaccensis] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A443NRI4 | Aspartic proteinase CDR1 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00978500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology