Basic Information
Locus ID:
gene.Cymno18g03800
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr18 | 9922888 | 9926108 | + | gene.Cymno18g03800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.38 | 113,190.87 Da | 37.10 | 96.67 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 713 | 1005 | 3.1E-41 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 71 | 1.7E-7 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 294 | 315 | 0.83 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 713 | 1008 | 3.02E-66 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 104 | 471 | 1.02E-61 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 405 | 621 | 8.33E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 385 | 626 | 2.1E-58 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 234 | 384 | 2.3E-47 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 146 | 9.0E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 802 | 1024 | 1.5E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 690 | 801 | 2.4E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 233 | 1.6E-21 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 123 | 147 | 28.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 710 | 1025 | 6.9E-22 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 339 | 363 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 291 | 314 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 555 | 578 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 435 | 459 | 65.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 710 | 1025 | 36.739227 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 858 | 870 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 716 | 739 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1012 | 1043 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010934709.1 | leucine-rich repeat receptor-like protein kinase TDR [Elaeis guineensis] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A843XG58 | Protein kinase domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_051198 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology