Basic Information
Locus ID:
gene.Cymno18g02910
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr18 | 3753466 | 3756169 | - | gene.Cymno18g02910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.51 | 74,459.82 Da | 45.31 | 94.51 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 421 | 682 | 9.5335E-87 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 70 | 8.4E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 146 | 205 | 9.6E-10 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 419 | 682 | 1.2E-32 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 239 | 5.35E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 393 | 682 | 5.69E-53 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 242 | 2.1E-17 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 391 | 493 | 6.4E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 180 | 3.8E-39 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 495 | 687 | 2.3E-38 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 415 | 687 | 27.142239 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010941035.1 | probable leucine-rich repeat receptor-like protein kinase At5g63930 [Elaeis guineensis] | 0 |
| Q6K4T4 | LRR receptor kinase SERK2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERK4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9Q628 | Receptor-like protein kinase OS=Zostera marina OX=29655 GN=ZOSMA_106G00410 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology