Basic Information
Locus ID:
gene.Cymno18g02790
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr18 | 3362506 | 3367405 | + | gene.Cymno18g02790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 79,122.66 Da | 36.62 | 86.33 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 379 | 677 | 4.94416E-128 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 348 | 663 | 2.4E-96 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 379 | 688 | 3.66E-71 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 382 | 683 | 9.2E-45 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 140 | - | - |
| Coils | Coil | Coil | 248 | 268 | - | - |
| Coils | Coil | Coil | 310 | 330 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61130.1 | galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_010272612.1 | PREDICTED: polygalacturonate 4-alpha-galacturonosyltransferase-like [Nelumbo nucifera] | 0 |
| Q9LE59 | Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana OX=3702 GN=GAUT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PFC0 | Hexosyltransferase OS=Zostera marina OX=29655 GN=ZOSMA_25G01590 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology