Basic Information
Locus ID:
gene.Cymno17g06150
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr17 | 12706820 | 12711020 | + | gene.Cymno17g06150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 81,336.30 Da | 51.48 | 87.80 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 177 | 264 | 2.5E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 59 | 150 | 3.2E-15 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 393 | 657 | 9.7E-30 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 377 | 680 | 9.97E-58 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 464 | 664 | 9.0E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 351 | 463 | 3.7E-21 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 166 | 267 | 7.5E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 52 | 154 | 1.1E-22 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 161 | 267 | 15.58364 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 389 | 663 | 27.764135 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 52 | 154 | 18.824293 | IPR002902 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_029122682.1 | LOW QUALITY PROTEIN: putative receptor-like protein kinase At4g00960 [Elaeis guineensis] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A0K9NPU1 | Receptor-like protein kinase, putative,expressed OS=Zostera marina OX=29655 GN=ZOSMA_75G00360 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno13g00600, gene.Cymno17g06150 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g29460 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g01480 |
| Zosteraceae | Zostera marina | 1 | Zosma03g31780.v3.1 |