Basic Information
Locus ID:
gene.Cymno17g04780
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr17 | 11740980 | 11743460 | + | gene.Cymno17g04780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 34,424.91 Da | 39.59 | 94.92 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 18 | 276 | 3.91184E-99 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 14 | 273 | 8.5E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 274 | 3.1E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 87 | 4.4E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 88 | 284 | 2.6E-53 | - |
| SMART | SM00220 | serkin_6 | 12 | 274 | 1.2E-19 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 2 | 279 | 3.5E-33 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 12 | 275 | 35.212753 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 18 | 40 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 133 | 145 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52540.2 | - | 0 |
| RefSeq | XP_020226707.1 | PTI1-like tyrosine-protein kinase At3g15890 [Cajanus cajan] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9RJI8 | PTI1-like tyrosine-protein kinase At3g15890 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105049437 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology