Basic Information
Locus ID:
gene.Cymno17g03770
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr17 | 10695634 | 10729986 | - | gene.Cymno17g03770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 105,899.63 Da | 37.44 | 93.04 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 635 | 899 | 5.02205E-99 | - |
| Pfam | PF11721 | Malectin domain | 366 | 546 | 1.4E-39 | IPR021720 |
| Pfam | PF00069 | Protein kinase domain | 631 | 896 | 8.3E-45 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 76 | 355 | 1.28E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 608 | 899 | 5.4E-81 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 148 | 2.5E-13 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 705 | 907 | 2.9E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 149 | 254 | 3.1E-23 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 602 | 704 | 5.2E-34 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 369 | 553 | 2.0E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 255 | 368 | 5.7E-15 | IPR032675 |
| SMART | SM00220 | serkin_6 | 629 | 899 | 3.3E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 629 | 910 | 37.799274 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 751 | 763 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_006653769.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Oryza brachyantha] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9P4T3 | Putative LRR receptor-like serine/threonine-protein kinase OS=Zostera marina OX=29655 GN=ZOSMA_38G01290 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology