Basic Information
Locus ID:
gene.Cymno17g01440
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr17 | 1605776 | 1617519 | - | gene.Cymno17g01440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 122,644.41 Da | 37.34 | 91.26 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 787 | 1049 | 1.71515E-98 | - |
| Pfam | PF00069 | Protein kinase domain | 782 | 1045 | 5.0E-48 | IPR000719 |
| Pfam | PF11721 | Malectin domain | 511 | 697 | 6.8E-43 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 175 | 483 | 2.72E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 765 | 1067 | 1.48E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 857 | 1060 | 2.5E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 750 | 856 | 1.6E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 365 | 478 | 8.6E-23 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 509 | 702 | 1.1E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 117 | 364 | 7.3E-47 | IPR032675 |
| SMART | SM00220 | serkin_6 | 781 | 1056 | 1.1E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 781 | 1055 | 38.760387 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 787 | 809 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 901 | 913 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.3 | - | 0 |
| RefSeq | XP_019710848.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X2 [Elaeis guineensis] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6J0PS69 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X2 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105060377 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology