Basic Information
Locus ID:
gene.Cymno17g01380
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr17 | 1274842 | 1285573 | + | gene.Cymno17g01380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 124,735.18 Da | 39.54 | 88.23 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 803 | 1065 | 4.33407E-95 | - |
| Pfam | PF11721 | Malectin domain | 525 | 710 | 1.5E-42 | IPR021720 |
| Pfam | PF00069 | Protein kinase domain | 798 | 1004 | 1.6E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 780 | 1065 | 2.7E-81 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 192 | 468 | 5.33E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 771 | 872 | 7.0E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 121 | 367 | 4.7E-46 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 873 | 1075 | 1.2E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 368 | 483 | 4.5E-22 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 522 | 715 | 2.3E-35 | - |
| SMART | SM00220 | serkin_6 | 797 | 1065 | 1.1E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 797 | 1081 | 38.873459 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 917 | 929 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 803 | 825 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1100 | 1116 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1100 | 1123 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_020103075.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X2 [Ananas comosus] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6P5GCK7 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X2 OS=Ananas comosus OX=4615 GN=LOC109720401 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology