Basic Information
Locus ID:
gene.Cymno16g03820
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr16 | 11598724 | 11603182 | - | gene.Cymno16g03820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.19 | 98,229.34 Da | 47.18 | 96.31 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 527 | 807 | 2.31989E-95 | - |
| Pfam | PF00069 | Protein kinase domain | 523 | 804 | 1.2E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 355 | 413 | 5.1E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 504 | 805 | 1.22E-72 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 244 | 423 | 2.51E-30 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 300 | 1.93E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 505 | 600 | 7.1E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 162 | 442 | 5.1E-72 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 161 | 6.2E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 601 | 821 | 2.3E-60 | - |
| SMART | SM00369 | LRR_typ_2 | 377 | 401 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 329 | 352 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 142 | 165 | 290.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 521 | 812 | 3.4E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 71 | 95 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 353 | 376 | 200.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 521 | 812 | 36.696823 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 656 | 668 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 527 | 551 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_010917293.1 | receptor-like protein kinase 5 [Elaeis guineensis] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9QYQ5 | receptor-like protein kinase 5 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105041917 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology