Basic Information
Locus ID:
gene.Cymno16g02490
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr16 | 4886664 | 4902363 | - | gene.Cymno16g02490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 84,281.74 Da | 40.79 | 74.18 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 160 | 218 | 8.0E-17 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 471 | 699 | 3.8E-69 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 285 | 429 | 6.9E-47 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 489 | 663 | 2.7E-185 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 283 | 702 | 2.7E-185 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 167 | 218 | 3.5E-13 | IPR011990 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 343 | 377 | 9.086975 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 66 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_008775808.2 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1 [Phoenix dactylifera] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NW37 | ribonuclease P OS=Zostera marina OX=29655 GN=ZOSMA_5G00210 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology