Basic Information
Locus ID:
gene.Cymno16g01580
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Short Name:
SOS2
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr16 | 1374210 | 1381584 | - | gene.Cymno16g01580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 49,674.91 Da | 29.84 | 93.89 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 307 | 416 | 3.05595E-45 | - |
| Pfam | PF00069 | Protein kinase domain | 7 | 260 | 3.7E-68 | IPR000719 |
| Pfam | PF03822 | NAF domain | 303 | 362 | 2.4E-20 | IPR004041 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 261 | 7.82E-87 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 86 | 3.4E-31 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 300 | 426 | 3.9E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 87 | 268 | 7.5E-58 | - |
| SMART | SM00220 | serkin_6 | 7 | 260 | 4.3E-101 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 7 | 260 | 49.219547 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 301 | 325 | 12.063007 | IPR018451 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 126 | 138 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 13 | 36 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35410.1 | Protein kinase superfamily protein. encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition | 0 |
| RefSeq | XP_010250123.1 | PREDICTED: CBL-interacting serine/threonine-protein kinase 24 [Nelumbo nucifera] | 0 |
| Q9LDI3 | CBL-interacting serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CIPK24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7ZBS4 | non-specific serine/threonine protein kinase OS=Nelumbo nucifera OX=4432 GN=LOC104592446 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology