Basic Information
Locus ID:
gene.Cymno16g01120
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Universal stress protein family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr16 | 916736 | 920401 | - | gene.Cymno16g01120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 87,828.34 Da | 40.73 | 73.76 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 21 | 165 | 1.5018E-40 | - |
| CDD | cd14066 | STKc_IRAK | 507 | 767 | 3.85328E-86 | - |
| Pfam | PF00582 | Universal stress protein family | 24 | 144 | 4.0E-8 | IPR006016 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 503 | 759 | 3.0E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 481 | 760 | 2.02E-68 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 23 | 142 | 2.6E-9 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 21 | 163 | 9.5E-10 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 574 | 770 | 9.4E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 465 | 573 | 3.5E-25 | - |
| SMART | SM00220 | serkin_6 | 501 | 767 | 1.3E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 501 | 767 | 34.859402 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 507 | 528 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 619 | 631 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 295 | - | - |
| Coils | Coil | Coil | 449 | 483 | - | - |
| Coils | Coil | Coil | 372 | 399 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_008808214.2 | U-box domain-containing protein 52 isoform X1 [Phoenix dactylifera] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8B7CX14 | U-box domain-containing protein 52 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103720337 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology