Basic Information
Locus ID:
gene.Cymno16g01110
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Universal stress protein family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr16 | 911384 | 913741 | - | gene.Cymno16g01110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 73,548.01 Da | 43.11 | 84.04 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 16 | 161 | 4.96301E-42 | - |
| CDD | cd14066 | STKc_IRAK | 381 | 634 | 3.10845E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 377 | 631 | 2.8E-40 | IPR001245 |
| Pfam | PF00582 | Universal stress protein family | 18 | 141 | 3.4E-10 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 351 | 633 | 1.12E-70 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 140 | 1.0E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 354 | 447 | 8.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 651 | 4.4E-50 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 15 | 160 | 7.8E-12 | IPR014729 |
| SMART | SM00220 | serkin_6 | 375 | 635 | 8.6E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 375 | 638 | 34.831135 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 381 | 402 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 493 | 505 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 297 | - | - |
| Coils | Coil | Coil | 309 | 340 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G26150.2 | - | 0 |
| RefSeq | XP_008808214.2 | U-box domain-containing protein 52 isoform X1 [Phoenix dactylifera] | 0 |
| Q9FKG5 | U-box domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=PUB51 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7I8KYS9 | Protein kinase domain-containing protein OS=Spirodela intermedia OX=51605 GN=SI8410_09013631 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology