Basic Information
Locus ID:
gene.Cymno16g00890
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr16 | 728966 | 739924 | + | gene.Cymno16g00890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 54,379.21 Da | 38.75 | 68.37 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 130 | 408 | 5.20945E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 128 | 404 | 1.5E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 109 | 434 | 5.96E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 104 | 209 | 1.8E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 210 | 427 | 4.0E-61 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 124 | 409 | 39.113739 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 254 | 266 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 130 | 162 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 100 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15080.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010242354.1 | PREDICTED: probable receptor-like protein kinase At5g15080 isoform X1 [Nelumbo nucifera] | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7Z4Q8 | probable receptor-like protein kinase At5g15080 isoform X1 OS=Nelumbo nucifera OX=4432 GN=LOC104586733 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology