Basic Information
Locus ID:
gene.Cymno16g00500
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr16 | 323270 | 324628 | - | gene.Cymno16g00500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 50,161.53 Da | 47.35 | 71.84 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 261 | 303 | 1.9E-8 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 212 | 252 | 6.7E-7 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 177 | 419 | 1.06E-40 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 173 | 383 | 8.0E-35 | IPR015915 |
| SMART | SM00612 | kelc_smart | 217 | 265 | 0.0011 | IPR006652 |
| SMART | SM00612 | kelc_smart | 270 | 317 | 5.4E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_019704430.1 | F-box/kelch-repeat protein At1g80440 [Elaeis guineensis] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A843X6G4 | F-box domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_045369 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology