Basic Information
Locus ID:
gene.Cymno16g00490
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr16 | 319898 | 321097 | - | gene.Cymno16g00490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 40,431.48 Da | 47.25 | 72.81 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 183 | 218 | 6.5E-7 | IPR006652 |
| Pfam | PF00646 | F-box domain | 12 | 52 | 4.6E-4 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 126 | 169 | 9.2E-8 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 51 | 1.02E-5 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 96 | 355 | 1.57E-35 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 84 | 362 | 2.0E-34 | IPR015915 |
| SMART | SM00612 | kelc_smart | 185 | 232 | 1.4E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 134 | 182 | 1.1E-4 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15670.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_008809023.2 | F-box/kelch-repeat protein At1g80440-like [Phoenix dactylifera] | 0 |
| Q9LMR5 | F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9PND1 | Kelch repeat-containing F-box-like OS=Zostera marina OX=29655 GN=ZOSMA_208G00180 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology