Basic Information
Locus ID:
gene.Cymno15g07390
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr15 | 15339810 | 15342602 | - | gene.Cymno15g07390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 30,862.31 Da | 57.02 | 85.86 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14279 | CUE | 47 | 83 | 1.58424E-8 | - |
| Pfam | PF02845 | CUE domain | 48 | 82 | 2.5E-6 | IPR003892 |
| SUPERFAMILY | SSF46934 | UBA-like | 42 | 90 | 1.43E-10 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 40 | 89 | 9.6E-12 | - |
| SMART | SM00546 | cue_7 | 45 | 87 | 6.1E-7 | IPR003892 |
| ProSiteProfiles | PS51140 | CUE domain profile. | 45 | 88 | 13.99164 | IPR003892 |
| Coils | Coil | Coil | 222 | 249 | - | - |
| Coils | Coil | Coil | 184 | 211 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G32440.1 | Ubiquitin system component Cue protein. | 0 |
| RefSeq | XP_008784510.1 | uncharacterized protein LOC103703441 isoform X1 [Phoenix dactylifera] | 0 |
| TrEMBL | A0A0K9Q1J3 | Ubiquitin system component Cue protein OS=Zostera marina OX=29655 GN=ZOSMA_118G00100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology