Basic Information
Locus ID:
gene.Cymno15g07030
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr15 | 15149465 | 15154570 | + | gene.Cymno15g07030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 57,862.38 Da | 39.91 | 86.36 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 41 | 299 | 9.07032E-132 | - |
| Pfam | PF00069 | Protein kinase domain | 42 | 300 | 3.4E-73 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 346 | 408 | 7.8E-8 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 418 | 481 | 4.1E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 329 | 507 | 2.15E-43 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 40 | 308 | 2.97E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 309 | 484 | 2.0E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 128 | 308 | 1.0E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 44 | 127 | 7.8E-24 | - |
| SMART | SM00220 | serkin_6 | 42 | 300 | 6.6E-94 | IPR000719 |
| SMART | SM00054 | efh_1 | 383 | 411 | 5.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 347 | 375 | 9.3E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 419 | 447 | 3.7E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 455 | 483 | 1.3E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 343 | 378 | 14.931837 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 415 | 450 | 14.680779 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 379 | 414 | 8.683267 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 451 | 486 | 13.369694 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 42 | 300 | 46.534088 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 48 | 71 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 356 | 368 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 162 | 174 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 464 | 476 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 428 | 440 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_034693474.1 | calcium-dependent protein kinase 13 [Vitis riparia] | 0 |
| Q6I5I8 | Calcium-dependent protein kinase 16 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK16 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9P6I1 | Putative Calcium-dependent protein kinase OS=Zostera marina OX=29655 GN=ZOSMA_397G00010 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology