Basic Information
Locus ID:
gene.Cymno15g06300
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
60s ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr15 | 14771403 | 14773809 | + | gene.Cymno15g06300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.82 | 14,682.95 Da | 30.55 | 85.15 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 1 | 134 | 8.5E-66 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 2 | 86 | 6.28E-18 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 1 | 134 | 1.6E-68 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 134 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05590.2 | - | 0 |
| RefSeq | XP_010259492.1 | PREDICTED: 60S ribosomal protein L18-3 [Nelumbo nucifera] | 0 |
| P42791 | Large ribosomal subunit protein eL18y OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2 | 0 | |
| TrEMBL | A0A1U8ABL6 | 60S ribosomal protein L18-3 OS=Nelumbo nucifera OX=4432 GN=LOC104598903 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology