Basic Information
Locus ID:
gene.Cymno15g05560
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr15 | 14094279 | 14102989 | + | gene.Cymno15g05560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 38,645.25 Da | 39.34 | 90.25 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 30 | 337 | 4.9E-76 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 25 | 342 | 8.76E-82 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 19 | 336 | 3.6E-101 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 8 | 213 | 6.3E-7 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 296 | 354 | 0.16 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 17 | 338 | 45.195522 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_010938205.1 | homocysteine S-methyltransferase 2 isoform X1 [Elaeis guineensis] | 0 |
| Q9FUM9 | Homocysteine S-methyltransferase 2 OS=Zea mays OX=4577 GN=HMT-2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9SEN1 | homocysteine S-methyltransferase 2 isoform X1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105057316 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology