Basic Information
Locus ID:
gene.Cymno14g10860
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr14 | 16302845 | 16365400 | - | gene.Cymno14g10860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.43 | 49,861.24 Da | 38.23 | 101.63 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 120 | 374 | 4.6E-75 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 137 | 372 | 5.03E-38 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 149 | 452 | 3.2E-73 | IPR027417 |
| SMART | SM00382 | AAA_5 | 172 | 310 | 7.3E-5 | IPR003593 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 316 | 398 | 11.881437 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 150 | 309 | 26.526968 | IPR020588 |
| ProSitePatterns | PS00321 | recA signature. | 331 | 339 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 369 | 398 | 1.0E-40 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 280 | 309 | 1.0E-40 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 208 | 237 | 1.0E-40 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 242 | 271 | 1.0E-40 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 328 | 356 | 1.0E-40 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_010907253.1 | DNA repair protein recA homolog 2, mitochondrial isoform X2 [Elaeis guineensis] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9Q2N8 | RecA OS=Zostera marina OX=29655 GN=ZOSMA_123G00480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology