HalophFGD

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Basic Information
Locus ID: gene.Cymno14g08910
Species & Taxonomic ID: Cymodocea nodosa & 55448
Genome Assembly: GCA_036874045.1
Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
Chromosome Start End Strand ID
Chr14 14507485 14512436 + gene.Cymno14g08910
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.04 23,328.85 Da 72.25 73.78 -0.24
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF52058 L domain-like 119 196 7.29E-9 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 50 211 1.3E-16 IPR032675
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_009408625.1 PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Musa acuminata subsp. malaccensis] 0
TrEMBL A0A804JQL2 (wild Malaysian banana) hypothetical protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=GSMUA_54250.1 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 6 jg17584, jg19759, jg34828, jg40197, jg9258, jg9259
Aizoaceae Mesembryanthemum crystallinum 2 gene_24968, gene_3855
Amaranthaceae Atriplex hortensis 2 Ah012593, Ah026410
Amaranthaceae Beta vulgaris 2 BVRB_6g136390, BVRB_6g151740
Amaranthaceae Salicornia bigelovii 3 Sbi_jg14050, Sbi_jg44767, Sbi_jg51916
Amaranthaceae Salicornia europaea 2 Seu_jg27319, Seu_jg9956
Amaranthaceae Suaeda aralocaspica 3 GOSA_00002198, GOSA_00025368, GOSA_00025370
Amaranthaceae Suaeda glauca 4 Sgl31778, Sgl34868, Sgl37063, Sgl40265
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000002026, gene:ENSEOMG00000002358 ...
gene:ENSEOMG00000002669, gene:ENSEOMG00000004011, gene:ENSEOMG00000025335, gene:ENSEOMG00000025959
Amaranthaceae Chenopodium quinoa 3 CQ.Regalona.r1.6AG0008900, CQ.Regalona.r1.6AG0017060 ...
CQ.Regalona.r1.6BG0009690
Anacardiaceae Pistacia vera 4 pistato.v30006980, pistato.v30021520, pistato.v30193170 ...
pistato.v30226860
Apiaceae Apium graveolens 5 Ag1G01497, Ag6G00444, Ag7G01428, AgUnG00323, AgUnG00436
Arecaceae Cocos nucifera 4 COCNU_06G016170, COCNU_13G005540, COCNU_14G011170 ...
COCNU_15G005900
Arecaceae Phoenix dactylifera 4 gene-LOC103704476, gene-LOC103708261, gene-LOC103712388 ...
gene-LOC103718209
Asparagaceae Asparagus officinalis 3 AsparagusV1_02.1467.V1.1, AsparagusV1_03.2008.V1.1 ...
AsparagusV1_03.2591.V1.1
Asteraceae Flaveria trinervia 3 Ftri13G24020, Ftri18G17288, Ftri9G23079
Brassicaceae Arabidopsis thaliana 2 AT1G69270.1, AT3G02130.1
Brassicaceae Eutrema salsugineum 2 Thhalv10018335m.g.v1.0, Thhalv10019938m.g.v1.0
Brassicaceae Schrenkiella parvula 2 Sp3g01200.v2.2, Sp5g24330.v2.2
Brassicaceae Brassica nigra 4 BniB03g046620.2N, BniB05g066220.2N, BniB07g034840.2N ...
BniB07g061470.2N
Casuarinaceae Casuarina equisetifolia 3 Ceq07G1157, Ceq08G0015, Ceq08G0438
Casuarinaceae Casuarina glauca 3 Cgl07G1214, Cgl08G0014, Cgl08G0391
Cymodoceaceae Cymodocea nodosa 4 gene.Cymno10g06900, gene.Cymno10g06910, gene.Cymno14g08910 ...
gene.Cymno14g08920
Hydrocharitaceae Thalassia testudinum 2 gene.Thate02g29620, gene.Thate08g13590
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-2200
Nitrariaceae Nitraria sibirica 3 evm.TU.LG03.401, evm.TU.LG04.572, evm.TU.LG05.43
Plantaginaceae Plantago ovata 5 Pov_00008182, Pov_00008184, Pov_00008587, Pov_00025960 ...
Pov_00028072
Plumbaginaceae Limonium bicolor 2 Lb4G22327, Lb6G32585
Poaceae Eleusine coracana subsp. coracana 6 gene-QOZ80_1AG0006240, gene-QOZ80_1BG0054960 ...
gene-QOZ80_7AG0551900, gene-QOZ80_7AG0575930, gene-QOZ80_7BG0582980, gene-QOZ80_7BG0607390
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.2HG0126860.1.CDS1 ...
HORVU.MOREX.r3.2HG0156970.1.CDS1, HORVU.MOREX.r3.3HG0231730.1.CDS1, HORVU.MOREX.r3.5HG0511490.1.CDS1
Poaceae Lolium multiflorum 4 gene-QYE76_039872, gene-QYE76_043153, gene-QYE76_053321 ...
gene-QYE76_061772
Poaceae Oryza coarctata 5 Oco02G000190, Oco05G023970, Oco06G024850, Oco13G011990 ...
Oco14G012750
Poaceae Oryza sativa 2 LOC_Os03g54900.1, LOC_Os07g41140.1
Poaceae Paspalum vaginatum 4 gene-BS78_01G076300, gene-BS78_02G007300 ...
gene-BS78_02G341600, gene-BS78_03G096200
Poaceae Puccinellia tenuiflora 3 Pt_Chr0303329, Pt_Chr0303338, Pt_Chr0603033
Poaceae Sporobolus alterniflorus 12 Chr01G004900, Chr03G002570, Chr04G028880, Chr07G027880 ...
Chr0G018720, Chr12G037350, Chr19G002730, Chr19G018830, Chr24G002400, Chr27G014540, Chr28G000390, Chr28G011120
Poaceae Thinopyrum elongatum 4 Tel2E01G341700, Tel2E01G479300, Tel3E01G146900 ...
Tel5E01G625000
Poaceae Triticum dicoccoides 8 gene_TRIDC2AG022530, gene_TRIDC2AG036940 ...
gene_TRIDC2BG026400, gene_TRIDC2BG040830, gene_TRIDC3AG009720, gene_TRIDC3BG013410, gene_TRIDC5AG057170, gene_TRIDC5BG061340
Poaceae Triticum aestivum 11 TraesCS2A02G176500.1.cds1, TraesCS2A02G260600.1.cds1 ...
TraesCS2B02G202900.1.cds1, TraesCS2B02G281400.1, TraesCS2D02G183900.1, TraesCS2D02G263100.1.cds1, TraesCS3B02G096000.1.cds1, TraesCS3D02G081000.1.cds1, TraesCS5A02G393000.1.cds1, TraesCS5B02G397900.1.cds1, TraesCS5D02G402900.1.cds1
Poaceae Zea mays 3 Zm00001eb214630_P001, Zm00001eb298670_P001 ...
Zm00001eb326880_P001
Poaceae Zoysia japonica 5 nbis-gene-16206, nbis-gene-32366, nbis-gene-32367 ...
nbis-gene-50440, nbis-gene-56236
Poaceae Zoysia macrostachya 3 Zma_g2764, Zma_g5897, Zma_g7454
Portulacaceae Portulaca oleracea 4 evm.TU.LG03.2222, evm.TU.LG13.500, evm.TU.LG17.1277 ...
evm.TU.LG21.194
Posidoniaceae Posidonia oceanica 2 gene.Posoc05g14630, gene.Posoc06g19760
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_11_RagTag.248, evm.TU.Scaffold_3_RagTag.1708 ...
evm.TU.Scaffold_6_RagTag.343
Rhizophoraceae Carallia pectinifolia 5 nbisL1-mrna-14174, nbisL1-mrna-1932, nbisL1-mrna-2019 ...
nbisL1-mrna-2078, nbisL1-mrna-2160
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-10595, nbisL1-mrna-11952, nbisL1-mrna-9238
Rhizophoraceae Ceriops zippeliana 3 nbisL1-mrna-14319, nbisL1-mrna-2901, nbisL1-mrna-306
Rhizophoraceae Kandelia candel 3 add.evm.TU.utg000005l.97, add.evm.TU.utg000011l.94 ...
add.evm.TU.utg000019l.89
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-16918, nbisL1-mrna-21422, nbisL1-mrna-21602
Rhizophoraceae Rhizophora mangle 4 nbisL1-mrna-17244, nbisL1-mrna-18217, nbisL1-mrna-18218 ...
nbisL1-mrna-18966
Salicaceae Populus euphratica 5 populus_peu06809, populus_peu09334, populus_peu09335 ...
populus_peu25142, populus_peu27104
Solanaceae Lycium barbarum 2 gene-LOC132615815, gene-LOC132618905
Solanaceae Solanum chilense 2 SOLCI000455700, SOLCI000565900
Solanaceae Solanum pennellii 2 gene-LOC107014790, gene-LOC107016390
Tamaricaceae Reaumuria soongarica 1 STRG.3614_chr02_-
Zosteraceae Zostera marina 1 Zosma03g29840.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.