Basic Information
Locus ID:
gene.Cymno14g06030
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr14 | 12298589 | 12301423 | + | gene.Cymno14g06030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 103,218.05 Da | 33.52 | 99.36 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 597 | 657 | 1.4E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 356 | 394 | 1.4E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 767 | 937 | 6.5E-32 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 99 | 137 | 4.2E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 188 | 248 | 5.7E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 312 | 333 | 0.71 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 405 | 710 | 1.22E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 756 | 937 | 1.35E-51 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 109 | 465 | 2.45E-63 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 296 | 396 | 5.7E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 400 | 700 | 2.2E-84 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 745 | 842 | 5.6E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 98 | 210 | 8.6E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 843 | 938 | 1.1E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 211 | 295 | 1.2E-21 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 620 | 643 | 250.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 765 | 944 | 1.4E-8 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 405 | 429 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 212 | 235 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 548 | 572 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 357 | 380 | 8.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 644 | 669 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 236 | 259 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 187 | 211 | 22.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 765 | 944 | 29.191669 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 887 | 899 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_039134248.1 | leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1, partial [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A7I8K315 | Protein kinase domain-containing protein OS=Spirodela intermedia OX=51605 GN=SI8410_02002713 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology