Basic Information
Locus ID:
gene.Cymno14g02710
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr14 | 9483474 | 9484910 | + | gene.Cymno14g02710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 51,132.10 Da | 42.64 | 80.17 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 26 | 101 | 1.09819E-20 | - |
| Pfam | PF02214 | BTB/POZ domain | 26 | 109 | 5.3E-13 | IPR003131 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 117 | 411 | 1.04E-8 | IPR036322 |
| SUPERFAMILY | SSF54695 | POZ domain | 24 | 108 | 1.02E-16 | IPR011333 |
| Gene3D | G3DSA:2.130.10.10 | - | 108 | 477 | 1.6E-6 | IPR015943 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 18 | 107 | 3.7E-18 | IPR011333 |
| SMART | SM00225 | BTB_4 | 24 | 118 | 5.9E-6 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_010275635.1 | PREDICTED: BTB/POZ domain-containing protein At5g41330 [Nelumbo nucifera] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7I8LKV3 | BTB_2 domain-containing protein OS=Spirodela intermedia OX=51605 GN=SI8410_18021237 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology