Basic Information
Locus ID:
gene.Cymno14g00030
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr14 | 124021 | 130491 | - | gene.Cymno14g00030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 59,908.05 Da | 40.85 | 73.00 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 12 | 226 | 3.1E-71 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 267 | 492 | 4.8E-59 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 284 | 459 | 3.0E-204 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 20 | 493 | 3.0E-204 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 22 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_008783995.2 | proteinaceous RNase P 2 [Phoenix dactylifera] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9Q107 | ribonuclease P OS=Zostera marina OX=29655 GN=ZOSMA_121G00180 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology