Basic Information
Locus ID:
gene.Cymno13g03150
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr13 | 2651741 | 2660310 | + | gene.Cymno13g03150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 111,769.16 Da | 32.75 | 90.17 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 706 | 971 | 2.60446E-95 | - |
| Pfam | PF11721 | Malectin domain | 433 | 618 | 7.5E-46 | IPR021720 |
| Pfam | PF13855 | Leucine rich repeat | 297 | 356 | 1.0E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 701 | 905 | 5.0E-46 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 100 | 409 | 7.48E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 678 | 969 | 2.83E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 985 | 1.0E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 285 | 402 | 3.7E-22 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 671 | 775 | 7.6E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 45 | 284 | 5.1E-51 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 431 | 623 | 1.1E-36 | - |
| SMART | SM00220 | serkin_6 | 700 | 973 | 9.1E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 700 | 973 | 36.68269 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 820 | 832 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 706 | 728 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_020103078.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 [Ananas comosus] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6P5GB39 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 OS=Ananas comosus OX=4615 GN=LOC109720402 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology